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  5. Pir_g38928

Pir_g38928


Description : not classified & original description: none


Gene families : OG0000259 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g38928
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00070380 evm_27.TU.AmTr_v1... Nitrate regulatory gene2 protein OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT2G19090 No alias Protein of unknown function (DUF630 and DUF632) 0.02 OrthoFinder output from all 47 species
AT3G60320 No alias Protein of unknown function (DUF630 and DUF632) 0.04 OrthoFinder output from all 47 species
Adi_g076957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09656 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g03854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38522.t1 Aspi01Gene38522 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67999.t1 Aspi01Gene67999 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0266.g060966 No alias not classified & original description: CDS=547-2748 0.03 OrthoFinder output from all 47 species
Cba_g01214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G081800.1 Ceric.14G081800 not classified & original description: pacid=50634286... 0.04 OrthoFinder output from all 47 species
Ceric.37G008500.1 Ceric.37G008500 not classified & original description: pacid=50616831... 0.03 OrthoFinder output from all 47 species
Dde_g11918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g11070.1 LOC_Os07g11070 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_137116g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g05030.1 No alias Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g24732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g20284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05269 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007453 No alias not classified & original description: CDS=206-1297 0.03 OrthoFinder output from all 47 species
Solyc08g068100.3.1 Solyc08g068100 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g20128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e002360_P001 Zm00001e002360 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e021917_P001 Zm00001e021917 Nitrate regulatory gene2 protein OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004107 chorismate synthase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
CC GO:0070652 HAUS complex IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006868 DUF630 1 57
IPR006867 DUF632 334 677
No external refs found!