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  5. Pir_g38869

Pir_g38869 (WIP3)


Aliases : WIP3

Description : C2H2 subclass WIP transcription factor & original description: none


Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g38869

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00243980 WIP2, NTT,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AMTR_s00093p00164790 WIP6, DOT5,... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
AT1G13290 WIP6, DOT5 C2H2-like zinc finger protein 0.03 OrthoFinder output from all 47 species
AT1G51220 WIP5 WIP domain protein 5 0.03 OrthoFinder output from all 47 species
Aspi01Gene00798.t1 WIP2, NTT,... C2H2 subclass WIP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012566 WIP5 C2H2 subclass WIP transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.11G037100.1 WIP5, Ceric.11G037100 C2H2 subclass WIP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dde_g21101 WIP2, NTT C2H2 subclass WIP transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g01153 WIP2, NTT C2H2 subclass WIP transcription factor & original... 0.04 OrthoFinder output from all 47 species
Gb_21793 WIP2, NTT C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os06g40960.1 WIP2, NTT, LOC_Os06g40960 C2H2 zinc finger transcription factor 0.02 OrthoFinder output from all 47 species
Solyc03g059270.4.1 WIP2, NTT, Solyc03g059270 C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Solyc06g074360.4.1 WIP3, Solyc06g074360 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e009663_P001 WIP6, DOT5,... C2H2 zinc finger transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004057 arginyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016598 protein arginylation IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
CC GO:0070531 BRCA1-A complex IEP HCCA
CC GO:0070552 BRISC complex IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013087 Znf_C2H2_type 155 174
No external refs found!