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  5. Pir_g38790

Pir_g38790


Description : RING-H2-class CTL-subclass E3 ubiquitin ligase & original description: none


Gene families : OG0000935 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000935_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g38790
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00246320 BB2, BB,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT5G52140 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
GSVIVT01032082001 BB2, BB Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
LOC_Os02g09820.1 LOC_Os02g09820 E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os06g03580.2 LOC_Os06g03580 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e036646_P001 BB2, BB, Zm00001e036646 E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 297 338
No external refs found!