Pir_g38746


Description : not classified & original description: none


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g38746

Target Alias Description ECC score Gene Family Method Actions
AT1G09155 PP2-B15, AtPP2-B15 phloem protein 2-B15 0.02 OrthoFinder output from all 47 species
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.03 OrthoFinder output from all 47 species
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.03 OrthoFinder output from all 47 species
AT4G19840 PP2-A1,... phloem protein 2-A1 0.02 OrthoFinder output from all 47 species
Als_g58763 PP2-A15, AtPP2-A15 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g24739 AtPP2-B9, SKIP3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g25309 PP2-A1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29919 PP2-A1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55186.t1 AtPP2-B8,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08840 AtPP2-B8, PP2-B8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01026408001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os02g56750.1 AtPP2-B1,... F-box protein At2g02240 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os02g56770.1 LOC_Os02g56770 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g56810.1 AtPP2-B2,... no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os03g02550.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
MA_10434357g0020 PP2-B15, AtPP2-B15 F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g08170.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g08180.1 No alias F-box protein PP2-A15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g15172 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33762 PP2-A15, AtPP2-A15 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g069020.3.1 PP2-A1,... Protein PHLOEM PROTEIN 2-LIKE A1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc08g080360.3.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.02 OrthoFinder output from all 47 species
Solyc10g051160.2.1 MEE66, Solyc10g051160 Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g098200.2.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e034748_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!