1. Home
  2. Species
  3. Pleocnemia irregularis
  4. Sequence
  5. Pir_g38450

Pir_g38450 (ATBHLH029, BHLH029,...)


Aliases : ATBHLH029, BHLH029, FIT1, ATBHLH29, FRU, ATFIT1

Description : transcriptional regulator *(FIT) of iron homeostasis & original description: none


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g38450
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene35383.t1 AMS, Aspi01Gene35383 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0005.g009209 ATBHLH029,... bHLH-type transcription factor & original description: CDS=1-1536 0.04 OrthoFinder output from all 47 species
Ceric.01G112100.1 Ceric.01G112100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g07016 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031466001 ATBHLH029,... Nutrient uptake.iron uptake.reduction-based strategy... 0.02 OrthoFinder output from all 47 species
Len_g46228 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_16489g0010 No alias transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
MA_18800g0020 ATBHLH029,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_2643g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g29473 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09269 AMS bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.04 OrthoFinder output from all 47 species
Spa_g02622 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005319 lipid transporter activity IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 142 187
No external refs found!