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  5. Pir_g38221

Pir_g38221 (PRA1.B5)


Aliases : PRA1.B5

Description : B-G-class Rab-GDF protein & original description: none


Gene families : OG0000542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g38221

Target Alias Description ECC score Gene Family Method Actions
Aop_g11478 PRA1.B4 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.39G040500.1 PRA1.B2, Ceric.39G040500 B-G-class Rab-GDF protein & original description:... 0.04 OrthoFinder output from all 47 species
Dde_g17580 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05618 PRA1.B2 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24043 PRA1.B3 B-G-class Rab-GDF protein & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0186.g025049 PRA1.B3 B-G-class Rab-GDF protein & original description: CDS=1-630 0.04 OrthoFinder output from all 47 species
Sam_g06109 No alias B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40187 PRA1.B1 B-G-class Rab-GDF protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR004895 Prenylated_rab_accept_PRA1 78 180
No external refs found!