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  5. Pir_g38199

Pir_g38199


Description : not classified & original description: none


Gene families : OG0001646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001646_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g38199
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
AT1G14630 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Azfi_s0896.g091569 No alias not classified & original description: CDS=656-1702 0.03 OrthoFinder output from all 47 species
Len_g59343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37025 XRI1, XRI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g083410.4.1 XRI1, XRI, Solyc06g083410 Protein XRI1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e034311_P001 Zm00001e034311 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0097354 prenylation IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!