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  5. Pir_g38019

Pir_g38019


Description : chromatin architectural modulator *(DEK) & original description: none


Gene families : OG0001438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001438_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g38019

Target Alias Description ECC score Gene Family Method Actions
Adi_g021163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g023551 No alias chromatin architectural modulator *(DEK) & original... 0.02 OrthoFinder output from all 47 species
Adi_g057519 No alias chromatin architectural modulator *(DEK) & original... 0.02 OrthoFinder output from all 47 species
Als_g19234 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Als_g51377 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Aob_g05123 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Aop_g07111 No alias chromatin architectural modulator *(DEK) & original... 0.02 OrthoFinder output from all 47 species
Cba_g29482 No alias chromatin architectural modulator *(DEK) & original... 0.02 OrthoFinder output from all 47 species
Dac_g37244 No alias chromatin architectural modulator *(DEK) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g03874 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
MA_108165g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g19100.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g04863 No alias chromatin architectural modulator *(DEK) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0099.g019556 No alias chromatin architectural modulator *(DEK) & original... 0.02 OrthoFinder output from all 47 species
Sam_g10960 No alias chromatin architectural modulator *(DEK) & original... 0.02 OrthoFinder output from all 47 species
Sam_g16952 No alias chromatin architectural modulator *(DEK) & original... 0.03 OrthoFinder output from all 47 species
Smo438416 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g097490.4.1 Solyc03g097490 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g065490.3.1 Solyc07g065490 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000178 exosome (RNase complex) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003917 DNA topoisomerase type I (single strand cut, ATP-independent) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0042393 histone binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR014876 DEK_C 489 542
No external refs found!