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  5. Pir_g37939

Pir_g37939


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g37939
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT1G51200 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g013736 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g046887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g128566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22674 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36492 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22069 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g20480 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 108 145
IPR002653 Znf_A20 23 46
No external refs found!