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  5. Pir_g37889

Pir_g37889 (BW52, ATMYB52, MYB52)


Aliases : BW52, ATMYB52, MYB52

Description : MYB class-R2R3 subgroup-21 transcription factor & original description: none


Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g37889
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AT1G73410 MYB54, ATMYB54 myb domain protein 54 0.03 OrthoFinder output from all 47 species
Adi_g013098 AtMYB109, MYB109 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Adi_g074060 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
Aob_g11324 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Cba_g36351 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.04 OrthoFinder output from all 47 species
Cba_g53891 MYB54, ATMYB54 MYB class-R2R3 subgroup-21 transcription factor &... 0.03 OrthoFinder output from all 47 species
Ceric.25G047900.1 MYB1, AtMYB1,... not classified & original description: pacid=50594505... 0.03 OrthoFinder output from all 47 species
Ehy_g03575 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.04 OrthoFinder output from all 47 species
Ehy_g09232 ATMYB3R5, MYB3R-5 R1R2R3-MYB transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10489 MYBR1, MYB44,... MYB class-R2R3 subgroup-22/23 transcription factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01007731001 AtMYB98, MYB98 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01024774001 MYB64, AtMYB64 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
LOC_Os06g43090.1 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_34970g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_89683g0010 MYBR1, MYB44,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Ore_g27825 LOF2, MYB105, ATMYB105 MYB class-R2R3 subgroup-21 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ore_g33238 MYB3R-1,... R1R2R3-MYB transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45311 AtMYB3R4, MYB3R-4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g23501 MYB70, AtMYB70 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Pir_g50854 MYB88, AtMYB88 MYB class-R2R3 transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g24702 MYB73, ATMYB73 MYB class-R2R3 subgroup-22/23 transcription factor &... 0.03 OrthoFinder output from all 47 species
Solyc02g092930.1.1 MYBR1, MYB44,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc03g112890.1.1 AtMYB98, MYB98,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc04g064540.4.1 BW52, ATMYB52,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc09g055650.3.1 AtMYB98, MYB98,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e017365_P001 LOF2, MYB105,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!