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  5. Pir_g36396

Pir_g36396


Description : protein factor (NERD) of non-canonical RdDM pathway & original description: none


Gene families : OG0001217 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001217_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g36396

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01018827001 No alias Zinc finger CCCH domain-containing protein 19... 0.03 OrthoFinder output from all 47 species
Gb_13136 No alias protein factor (NERD) of non-canonical RdDM pathway 0.04 OrthoFinder output from all 47 species
Mp4g08690.1 No alias protein factor (NERD) of non-canonical RdDM pathway 0.03 OrthoFinder output from all 47 species
Pir_g43363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g103250.4.1 Solyc01g103250 Uncharacterized protein At5g08430 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc01g103340.4.1 Solyc01g103340 Uncharacterized protein At5g08430 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc02g062370.4.1 Solyc02g062370 protein factor (NERD) of non-canonical RdDM pathway 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0042393 histone binding IEP HCCA
MF GO:0046912 acyltransferase activity, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003121 SWIB_MDM2_domain 11 84
IPR000571 Znf_CCCH 1201 1224
IPR004343 Plus-3_dom 152 253
IPR003169 GYF 493 532
No external refs found!