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  5. Pir_g35710

Pir_g35710 (SKIP4)


Aliases : SKIP4

Description : substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase complex & original description: none


Gene families : OG0000469 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000469_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g35710
Cluster HCCA: Cluster_182

Target Alias Description ECC score Gene Family Method Actions
Aev_g03275 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_135002g0010 SKIP4 F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ore_g00593 SKIP4 substrate adaptor *(SKIP4) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Zm00001e013448_P001 SKIP4, Zm00001e013448 F-box/kelch-repeat protein SKIP4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004659 prenyltransferase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008318 protein prenyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0018342 protein prenylation IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0071816 tail-anchored membrane protein insertion into ER membrane IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0097354 prenylation IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 160 182
IPR006652 Kelch_1 113 156
IPR001810 F-box_dom 24 62
No external refs found!