AT5G40340


Description : Tudor/PWWP/MBT superfamily protein


Gene families : OG_01_0000897 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000897_tree ,
OG_02_0001976 (LandPlants) Phylogenetic Tree(s): OG_02_0001976_tree ,
OG_03_0002181 (SeedPlants) Phylogenetic Tree(s): OG_03_0002181_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G40340
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00210830 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_40891 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g38810.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os11g19810.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10197194g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc04g049950.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e027258_P002 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e031849_P002 No alias no hits & (original description: none) 0.08 Archaeplastida
AMTR_s00058p00210830 evm_27.TU.AmTr_v1... No description available 0.05 LandPlants
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.04 LandPlants
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.02 LandPlants
Gb_40891 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os05g38810.1 No alias no hits & (original description: none) 0.05 LandPlants
LOC_Os11g19810.1 No alias no hits & (original description: none) 0.03 LandPlants
MA_10197194g0010 No alias no hits & (original description: none) 0.05 LandPlants
Solyc04g049950.1.1 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e027258_P002 No alias no hits & (original description: none) 0.08 LandPlants
Zm00001e031849_P002 No alias no hits & (original description: none) 0.08 LandPlants
AMTR_s00058p00210830 evm_27.TU.AmTr_v1... No description available 0.05 SeedPlants
GSVIVT01016344001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.04 SeedPlants
GSVIVT01032455001 No alias Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.02 SeedPlants
LOC_Os05g38810.1 No alias no hits & (original description: none) 0.05 SeedPlants
MA_10197194g0010 No alias no hits & (original description: none) 0.05 SeedPlants
Zm00001e027258_P002 No alias no hits & (original description: none) 0.08 SeedPlants
Zm00001e031849_P002 No alias no hits & (original description: none) 0.08 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005730 nucleolus IDA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000313 PWWP_dom 126 211
No external refs found!