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  5. Pir_g34399

Pir_g34399


Description : not classified & original description: none


Gene families : OG0001679 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001679_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g34399

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00196350 evm_27.TU.AmTr_v1... Putative ripening-related protein 2 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
AMTR_s00002p00197000 evm_27.TU.AmTr_v1... Putative ripening-related protein 1 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
AMTR_s00005p00207640 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.05 OrthoFinder output from all 47 species
AMTR_s00005p00208720 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.07 OrthoFinder output from all 47 species
AMTR_s00005p00210680 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
AMTR_s00011p00263200 evm_27.TU.AmTr_v1... Putative ripening-related protein 5 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Aspi01Gene50260.t1 Aspi01Gene50260 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.32G075600.1 Ceric.32G075600 not classified & original description: pacid=50597647... 0.03 OrthoFinder output from all 47 species
Gb_09975 No alias Ripening-related protein grip22 OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
Gb_09976 No alias Ripening-related protein grip22 OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species
LOC_Os02g42450.1 LOC_Os02g42450 Putative ripening-related protein 2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os04g29550.1 LOC_Os04g29550 Putative ripening-related protein 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os06g02640.1 LOC_Os06g02640 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g34760.1 LOC_Os10g34760 Putative ripening-related protein 6 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os10g34770.1 LOC_Os10g34770 Putative ripening-related protein 7 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
Ore_g13696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29187 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g35967 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36438 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g36439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g21539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c5_25540V3.1 Pp3c5_25540 No annotation 0.02 OrthoFinder output from all 47 species
Smo99218 No alias Ripening-related protein grip22 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!