AT5G39040 (ALS1, ATTAP2, TAP2)

Aliases : ALS1, ATTAP2, TAP2

Description : transporter associated with antigen processing protein 2

Gene families : OG_01_0001563 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001563_tree ,
OG_02_0006377 (LandPlants) Phylogenetic Tree(s): OG_02_0006377_tree ,
OG_03_0007367 (SeedPlants) Phylogenetic Tree(s): OG_03_0007367_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G39040
Cluster	HCCA: Cluster_173

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00228170	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Cre16.g692300	No alias	Solute transport.primary active transport.ABC...	0.01	Archaeplastida
AMTR_s00047p00228170	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	LandPlants
AMTR_s00047p00228170	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0000325	plant-type vacuole	IDA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005773	vacuole	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005886	plasma membrane	ISM	Interproscan
CC	GO:0005886	plasma membrane	IBA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006857	oligopeptide transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008509	anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010035	response to inorganic substance	None	Extended
BP	GO:0010038	response to metal ion	None	Extended
BP	GO:0010044	response to aluminum ion	IMP	Interproscan
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015421	ABC-type oligopeptide transporter activity	IBA	Interproscan
MF	GO:0015440	ABC-type peptide transporter activity	None	Extended
BP	GO:0015833	peptide transport	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0016021	integral component of membrane	IBA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022853	active ion transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
BP	GO:0034220	ion transmembrane transport	None	Extended
BP	GO:0035672	oligopeptide transmembrane transport	IBA	Interproscan
MF	GO:0035673	oligopeptide transmembrane transporter activity	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	ISS	Interproscan
BP	GO:0042886	amide transport	None	Extended
MF	GO:0042887	amide transmembrane transporter activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IBA	Interproscan
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
BP	GO:0098656	anion transmembrane transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140359	ABC-type transporter activity	None	Extended
MF	GO:1904680	peptide transmembrane transporter activity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	414	564
IPR011527	ABC1_TM_dom	71	346

External Links

No external refs found!

AT5G39040 (ALS1, ATTAP2, TAP2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation