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  5. Pir_g33772

Pir_g33772


Description : not classified & original description: none


Gene families : OG0007936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007936_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g33772
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AT1G76280 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
BP GO:0019566 arabinose metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046373 L-arabinose metabolic process IEP HCCA
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 482 526
IPR002885 Pentatricopeptide_repeat 399 449
IPR002885 Pentatricopeptide_repeat 672 700
IPR002885 Pentatricopeptide_repeat 179 205
IPR002885 Pentatricopeptide_repeat 600 646
No external refs found!