AT5G38480 (RCI1, GRF3)


Aliases : RCI1, GRF3

Description : general regulatory factor 3


Gene families : OG_01_0000395 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000395_tree ,
OG_02_0000275 (LandPlants) Phylogenetic Tree(s): OG_02_0000275_tree ,
OG_03_0000777 (SeedPlants) Phylogenetic Tree(s): OG_03_0000777_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G38480
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021352.44 No alias 14-3-3-like protein GF14 iota OS=Arabidopsis thaliana 0.02 Archaeplastida
Cpa|evm.model.tig00022075.52 No alias 14-3-3-like protein GF14 epsilon OS=Arabidopsis thaliana 0.05 Archaeplastida
Cre06.g257500 No alias 14-3-3-like protein OS=Chlamydomonas reinhardtii 0.03 Archaeplastida
Cre12.g559250 No alias 14-3-3-like protein OS=Chlamydomonas reinhardtii 0.04 Archaeplastida
Gb_04318 No alias 14-3-3-like protein OS=Lilium longiflorum... 0.04 Archaeplastida
LOC_Os04g38870.3 No alias 14-3-3-like protein GF14-B OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os08g33370.2 No alias 14-3-3-like protein GF14-C OS=Oryza sativa subsp.... 0.08 Archaeplastida
MA_12670g0020 No alias 14-3-3-like protein B OS=Vicia faba... 0.04 Archaeplastida
Mp1g06270.1 No alias 14-3-3-like protein OS=Lilium longiflorum... 0.05 Archaeplastida
Mp7g14230.1 No alias 14-3-3-like protein B OS=Vicia faba... 0.02 Archaeplastida
Pp3c10_14250V3.1 No alias general regulatory factor 12 0.04 Archaeplastida
Pp3c23_10780V3.1 No alias general regulatory factor 7 0.05 Archaeplastida
Pp3c24_7780V3.1 No alias general regulatory factor 7 0.08 Archaeplastida
Smo439395 No alias 14-3-3 protein 6 OS=Solanum lycopersicum 0.06 Archaeplastida
Smo77993 No alias 14-3-3 protein 7 OS=Solanum lycopersicum 0.03 Archaeplastida
Solyc04g012120.3.1 No alias 14-3-3 protein 5 OS=Solanum lycopersicum... 0.07 Archaeplastida
Solyc12g010860.2.1 No alias 14-3-3 protein 8 OS=Solanum lycopersicum... 0.09 Archaeplastida
Gb_04318 No alias 14-3-3-like protein OS=Lilium longiflorum... 0.04 LandPlants
LOC_Os08g33370.2 No alias 14-3-3-like protein GF14-C OS=Oryza sativa subsp.... 0.05 LandPlants
MA_12670g0020 No alias 14-3-3-like protein B OS=Vicia faba... 0.04 LandPlants
Mp1g06270.1 No alias 14-3-3-like protein OS=Lilium longiflorum... 0.04 LandPlants
Pp3c10_14250V3.1 No alias general regulatory factor 12 0.04 LandPlants
Pp3c23_10780V3.1 No alias general regulatory factor 7 0.05 LandPlants
Pp3c23_11080V3.1 No alias general regulatory factor 7 0.02 LandPlants
Pp3c24_7780V3.1 No alias general regulatory factor 7 0.08 LandPlants
Smo439395 No alias 14-3-3 protein 6 OS=Solanum lycopersicum 0.06 LandPlants
Smo77993 No alias 14-3-3 protein 7 OS=Solanum lycopersicum 0.03 LandPlants
Solyc04g012120.3.1 No alias 14-3-3 protein 5 OS=Solanum lycopersicum... 0.07 LandPlants
Solyc12g010860.2.1 No alias 14-3-3 protein 8 OS=Solanum lycopersicum... 0.07 LandPlants
AT4G09000 GRF1, GF14 CHI general regulatory factor 1 0.03 SeedPlants
Gb_04318 No alias 14-3-3-like protein OS=Lilium longiflorum... 0.03 SeedPlants
LOC_Os03g50290.2 No alias 14-3-3-like protein GF14-F OS=Oryza sativa subsp.... 0.02 SeedPlants
LOC_Os08g33370.2 No alias 14-3-3-like protein GF14-C OS=Oryza sativa subsp.... 0.05 SeedPlants
MA_14148g0010 No alias 14-3-3-like protein GF14-C OS=Oryza sativa subsp.... 0.02 SeedPlants
Solyc02g063070.3.1 No alias 14-3-3 protein 4 OS=Solanum lycopersicum... 0.03 SeedPlants
Solyc04g012120.3.1 No alias 14-3-3 protein 5 OS=Solanum lycopersicum... 0.07 SeedPlants
Zm00001e024240_P005 No alias 14-3-3-like protein GF14-C OS=Oryza sativa subsp.... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IDA Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005794 Golgi apparatus IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0009407 toxin catabolic process RCA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
MF GO:0045309 protein phosphorylated amino acid binding TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR023410 14-3-3_domain 10 234
No external refs found!