AT5G37930


Description : Protein with RING/U-box and TRAF-like domains


Gene families : OG_01_0001805 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001805_tree ,
OG_02_0002175 (LandPlants) Phylogenetic Tree(s): OG_02_0002175_tree ,
OG_03_0002146 (SeedPlants) Phylogenetic Tree(s): OG_03_0002146_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G37930
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
MA_127844g0010 No alias Putative E3 ubiquitin-protein ligase SINA-like 6... 0.01 LandPlants
Zm00001e017793_P002 No alias SINA-class E3 ligase 0.02 LandPlants
MA_127844g0010 No alias Putative E3 ubiquitin-protein ligase SINA-like 6... 0.01 SeedPlants
Zm00001e017793_P002 No alias SINA-class E3 ligase 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process ISS Interproscan
BP GO:0007275 multicellular organism development ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR018121 7-in-absentia-prot_TRAF-dom 155 234
No external refs found!