AT5G37800 (ATRSL1, RSL1)


Aliases : ATRSL1, RSL1

Description : RHD SIX-LIKE 1


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G37800
Cluster HCCA: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00250370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AMTR_s00066p00183410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.05 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.05 Archaeplastida
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.04 Archaeplastida
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.07 Archaeplastida
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT3G59060 PIL6, PIF5 phytochrome interacting factor 3-like 6 0.04 Archaeplastida
AT3G62090 PIL2, PIF6 phytochrome interacting factor 3-like 2 0.02 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.05 Archaeplastida
AT4G36930 SPT basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01030846001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
Gb_27302 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_27869 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g51140.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os02g48060.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
LOC_Os12g40590.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os12g40730.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_100071g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_29186g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_29441g0010 No alias transcription factor (bHLH) 0.06 Archaeplastida
MA_306658g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_83500g0010 No alias transcription factor (bHLH) 0.07 Archaeplastida
MA_88831g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Mp1g01110.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Mp5g09710.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Mp6g21470.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c14_16620V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c16_21590V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
Pp3c27_8050V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.04 Archaeplastida
Pp3c3_8460V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
Pp3c4_24380V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 Archaeplastida
Smo405220 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.08 Archaeplastida
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc06g008030.3.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e027758_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.04 LandPlants
AT1G27740 RSL4 root hair defective 6-like 4 0.04 LandPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 LandPlants
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 LandPlants
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.04 LandPlants
AT4G36930 SPT basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 LandPlants
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 LandPlants
Gb_06182 No alias transcription factor (bHLH) 0.01 LandPlants
Gb_27869 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.04 LandPlants
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.04 LandPlants
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.03 LandPlants
MA_100071g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_306658g0010 No alias transcription factor (bHLH) 0.03 LandPlants
MA_83500g0010 No alias transcription factor (bHLH) 0.03 LandPlants
MA_88831g0010 No alias transcription factor (bHLH) 0.02 LandPlants
Mp1g01110.1 No alias transcription factor (bHLH) 0.01 LandPlants
Mp5g09710.1 No alias transcription factor (bHLH) 0.03 LandPlants
Mp6g21470.1 No alias transcription factor (bHLH) 0.02 LandPlants
Pp3c14_16620V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
Pp3c27_8050V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 LandPlants
Pp3c4_24380V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.01 LandPlants
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.07 LandPlants
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.05 LandPlants
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc11g005780.3.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.04 LandPlants
Zm00001e002331_P003 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.04 LandPlants
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.04 LandPlants
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.04 LandPlants
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.02 LandPlants
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 SeedPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 SeedPlants
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 SeedPlants
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.04 SeedPlants
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 SeedPlants
GSVIVT01030846001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 SeedPlants
LOC_Os02g48060.1 No alias transcription factor (bHLH) 0.01 SeedPlants
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.01 SeedPlants
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.01 SeedPlants
LOC_Os12g39850.1 No alias transcription factor (bHLH) 0.02 SeedPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.05 SeedPlants
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.03 SeedPlants
Solyc10g049780.1.1 No alias transcription factor (bHLH) 0.01 SeedPlants
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.02 SeedPlants
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.03 SeedPlants
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.02 SeedPlants
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 216 257
No external refs found!