Pir_g32469 (TUB6)

Aliases : TUB6

Description : beta-Tubulin component *(TUB) of alpha-beta-Tubulin heterodimer & original description: none

Gene families : OG0000152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000152_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g32469

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01009914001	TUB1	Tubulin beta-1 chain OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
GSVIVT01037405001	TUB2	Tubulin beta-4 chain OS=Eleusine indica	0.04	OrthoFinder output from all 47 species
Lfl_g06065	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Lfl_g07733	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Mp2g00620.1	TUB2	component beta-Tubulin of alpha-beta-Tubulin heterodimer	0.02	OrthoFinder output from all 47 species
Ore_g04175	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Ore_g15539	TUB6	beta-Tubulin component *(TUB) of alpha-beta-Tubulin...	0.02	OrthoFinder output from all 47 species
Ppi_g41232	TUB8	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo23403	TUB2	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Smo410535	TUB2	Cytoskeleton.microtubular network.alpha-beta-Tubulin...	0.03	OrthoFinder output from all 47 species
Tin_g39110	TUB1	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003008	Tubulin_FtsZ_GTPase	3	211
IPR018316	Tubulin/FtsZ_2-layer-sand-dom	261	382

External Links

No external refs found!