AT5G37020 (ARF8, ATARF8)

Aliases : ARF8, ATARF8

Description : auxin response factor 8

Gene families : OG_01_0000080 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000080_tree ,
OG_02_0000516 (LandPlants) Phylogenetic Tree(s): OG_02_0000516_tree ,
OG_03_0000730 (SeedPlants) Phylogenetic Tree(s): OG_03_0000730_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G37020
Cluster	HCCA: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00157690	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.B3...	0.04	Archaeplastida
AMTR_s00211p00025860	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.B3...	0.03	Archaeplastida
AT2G33860	ARF3, ETT	Transcriptional factor B3 family protein /...	0.06	Archaeplastida
AT3G61830	ARF18	auxin response factor 18	0.03	Archaeplastida
GSVIVT01011008001	No alias	RNA biosynthesis.transcriptional activation.B3...	0.03	Archaeplastida
GSVIVT01020805001	No alias	RNA biosynthesis.transcriptional activation.B3...	0.03	Archaeplastida
GSVIVT01021552001	No alias	RNA biosynthesis.transcriptional activation.B3...	0.06	Archaeplastida
Gb_31132	No alias	transcription factor (ARF)	0.03	Archaeplastida
Gb_33804	No alias	transcription factor (ARF)	0.02	Archaeplastida
Gb_39686	No alias	transcription factor (ARF)	0.04	Archaeplastida
LOC_Os01g13520.1	No alias	transcription factor (ARF)	0.04	Archaeplastida
LOC_Os04g36054.1	No alias	transcription factor (ARF)	0.02	Archaeplastida
LOC_Os04g43910.1	No alias	transcription factor (ARF)	0.05	Archaeplastida
LOC_Os04g56850.1	No alias	transcription factor (ARF)	0.05	Archaeplastida
LOC_Os05g43920.1	No alias	transcription factor (ARF)	0.04	Archaeplastida
LOC_Os06g46410.1	No alias	transcription factor (ARF)	0.03	Archaeplastida
LOC_Os06g47150.1	No alias	transcription factor (ARF)	0.02	Archaeplastida
LOC_Os10g33940.1	No alias	transcription factor (ARF)	0.03	Archaeplastida
LOC_Os12g41950.1	No alias	transcription factor (ARF)	0.02	Archaeplastida
MA_10432580g0010	No alias	transcription factor (ARF)	0.05	Archaeplastida
MA_137387g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_92651g0010	No alias	transcription factor (ARF)	0.02	Archaeplastida
Mp2g02890.1	No alias	Auxin response factor 19 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
Pp3c13_4720V3.1	No alias	auxin response factor 6	0.04	Archaeplastida
Pp3c14_16990V3.1	No alias	auxin response factor 6	0.02	Archaeplastida
Smo438333	No alias	Auxin response factor 11 OS=Oryza sativa subsp. indica	0.02	Archaeplastida
Solyc01g096070.3.1	No alias	transcription factor (ARF)	0.04	Archaeplastida
Solyc02g037530.3.1	No alias	transcription factor (ARF)	0.02	Archaeplastida
Solyc07g042260.4.1	No alias	transcription factor (ARF)	0.04	Archaeplastida
Solyc08g008380.4.1	No alias	transcription factor (ARF)	0.04	Archaeplastida
Solyc08g082630.3.1	No alias	transcription factor (ARF)	0.04	Archaeplastida
Solyc10g086130.3.1	No alias	transcription factor (ARF)	0.03	Archaeplastida
Solyc11g069190.2.1	No alias	transcription factor (ARF)	0.03	Archaeplastida
Zm00001e003229_P002	No alias	transcription factor (ARF)	0.04	Archaeplastida
Zm00001e004554_P002	No alias	transcription factor (ARF)	0.03	Archaeplastida
Zm00001e006577_P003	No alias	transcription factor (ARF)	0.06	Archaeplastida
Zm00001e012670_P001	No alias	transcription factor (ARF)	0.06	Archaeplastida
Zm00001e015164_P002	No alias	transcription factor (ARF)	0.03	Archaeplastida
Zm00001e016366_P002	No alias	transcription factor (ARF)	0.03	Archaeplastida
Zm00001e018126_P002	No alias	transcription factor (ARF)	0.04	Archaeplastida
Zm00001e023038_P001	No alias	transcription factor (ARF)	0.04	Archaeplastida
Zm00001e030325_P003	No alias	transcription factor (ARF)	0.02	Archaeplastida
Zm00001e041910_P003	No alias	transcription factor (ARF)	0.05	Archaeplastida
AMTR_s00007p00267580	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.B3...	0.02	LandPlants
AMTR_s00029p00157690	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.B3...	0.04	LandPlants
GSVIVT01020805001	No alias	RNA biosynthesis.transcriptional activation.B3...	0.02	LandPlants
LOC_Os04g56850.1	No alias	transcription factor (ARF)	0.04	LandPlants
LOC_Os06g46410.1	No alias	transcription factor (ARF)	0.02	LandPlants
MA_122218g0010	No alias	transcription factor (ARF)	0.02	LandPlants
Pp3c13_4720V3.1	No alias	auxin response factor 6	0.03	LandPlants
Pp3c14_16990V3.1	No alias	auxin response factor 6	0.02	LandPlants
Solyc02g037530.3.1	No alias	transcription factor (ARF)	0.02	LandPlants
Solyc07g042260.4.1	No alias	transcription factor (ARF)	0.04	LandPlants
Zm00001e003229_P002	No alias	transcription factor (ARF)	0.03	LandPlants
Zm00001e006577_P003	No alias	transcription factor (ARF)	0.04	LandPlants
Zm00001e018126_P002	No alias	transcription factor (ARF)	0.03	LandPlants
Zm00001e041910_P003	No alias	transcription factor (ARF)	0.03	LandPlants
AMTR_s00029p00157690	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.B3...	0.03	SeedPlants
Gb_32864	No alias	transcription factor (ARF)	0.01	SeedPlants
LOC_Os04g56850.1	No alias	transcription factor (ARF)	0.01	SeedPlants
LOC_Os06g46410.1	No alias	transcription factor (ARF)	0.01	SeedPlants
MA_122218g0010	No alias	transcription factor (ARF)	0.02	SeedPlants
Solyc02g037530.3.1	No alias	transcription factor (ARF)	0.02	SeedPlants
Zm00001e003229_P002	No alias	transcription factor (ARF)	0.01	SeedPlants
Zm00001e006577_P003	No alias	transcription factor (ARF)	0.02	SeedPlants
Zm00001e018126_P002	No alias	transcription factor (ARF)	0.01	SeedPlants
Zm00001e041910_P003	No alias	transcription factor (ARF)	0.01	SeedPlants

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	None	Extended
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	TAS	Interproscan
BP	GO:0007389	pattern specification process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009733	response to auxin	IMP	Interproscan
BP	GO:0009791	post-embryonic development	None	Extended
BP	GO:0009799	specification of symmetry	None	Extended
BP	GO:0009855	determination of bilateral symmetry	RCA	Interproscan
BP	GO:0009886	post-embryonic animal morphogenesis	RCA	Interproscan
BP	GO:0009887	animal organ morphogenesis	RCA	Interproscan
BP	GO:0009888	tissue development	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009908	flower development	IGI	Interproscan
BP	GO:0009909	regulation of flower development	RCA	Interproscan
BP	GO:0010016	shoot system morphogenesis	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010051	xylem and phloem pattern formation	RCA	Interproscan
BP	GO:0010154	fruit development	IMP	Interproscan
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048367	shoot system development	None	Extended
BP	GO:0048439	flower morphogenesis	RCA	Interproscan
BP	GO:0048481	plant ovule development	RCA	Interproscan
BP	GO:0048507	meristem development	RCA	Interproscan
BP	GO:0048519	negative regulation of biological process	RCA	Interproscan
BP	GO:0048580	regulation of post-embryonic development	None	Extended
BP	GO:0048608	reproductive structure development	None	Extended
BP	GO:0048731	system development	None	Extended
BP	GO:0048831	regulation of shoot system development	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051239	regulation of multicellular organismal process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090567	reproductive shoot system development	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000026	regulation of multicellular organismal development	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2000241	regulation of reproductive process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR010525	Auxin_resp	252	335
IPR033389	AUX/IAA_dom	698	790
IPR003340	B3_DNA-bd	126	226

External Links

No external refs found!

AT5G37020 (ARF8, ATARF8)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation