Smo407186 (PACid_15416756)


Aliases : PACid_15416756

Description : 27.3.67 RNA.regulation of transcription.putative transcription regulator PHD finger family protein FUNCTIONS IN: zinc ion binding EXPRESSED IN: 24 plant structures EXPRESSED DURING: 15 growth stages CONTAINS InterPro DOMAIN/s: Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Zinc finger, PHD-finger (InterPro:IPR019787) BEST Arabidopsis thaliana protein match is: homologue of trithorax (TAIR:AT2G31650.1). & (chl4|515252 : 169.0


Gene families : OG_01_0003243 (Gene family) Phylogenetic Tree(s): OG0003243_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo407186
Cluster HCCA cluster: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G77800 No alias PHD finger family protein 0.08 Gene family
GSVIVT01008944001 No alias 27.3.67 RNA.regulation of transcription.putative... 0.06 Gene family
LOC_Os02g52960 Os02g0768750,... 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
LOC_Os06g10690 Os06g0209300 27.3.67 RNA.regulation of transcription.putative... 0.01 Gene family
MA_10435451g0030 No alias 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
Solyc11g013530.2.1 Solyc11g013530.2 27.3.67 RNA.regulation of transcription.putative... 0.05 Gene family
Zm00001d018199 GRMZM2G368206 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
Zm00001d037156 GRMZM2G330024 27.3.67 RNA.regulation of transcription.putative... 0.06 Gene family
Zm00001d052149 GRMZM2G475583 27.3.67 RNA.regulation of transcription.putative... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!