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  5. Pir_g30928

Pir_g30928 (HSP93-V, DCA1,...)


Aliases : HSP93-V, DCA1, ATHSP93-V, CLPC, CLPC1

Description : not classified & original description: none


Gene families : OG0000193 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000193_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g30928

Target Alias Description ECC score Gene Family Method Actions
AT5G50920 HSP93-V, DCA1,... CLPC homologue 1 0.03 OrthoFinder output from all 47 species
Cba_g27001 SAG15, CLPD, ERD1 chaperone component *(ClpD) of chloroplast Clp-type... 0.05 OrthoFinder output from all 47 species
Ceric.15G073100.1 HSP93-V, DCA1,... chaperone component *(ClpC) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
Ceric.30G013400.1 SAG15, CLPD,... chaperone component *(ClpD) of chloroplast Clp-type... 0.02 OrthoFinder output from all 47 species
GSVIVT01008635001 No alias No description available 0.03 OrthoFinder output from all 47 species
Pir_g54163 HSP93-V, DCA1,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e008256_P006 SAG15, CLPD,... chaperone component ClpD of chloroplast Clp-type protease complex 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
InterPro domains Description Start Stop
IPR019489 Clp_ATPase_C 62 141
No external refs found!