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  5. Pir_g30508

Pir_g30508 (PGP5)


Aliases : PGP5

Description : not classified & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g30508

Target Alias Description ECC score Gene Family Method Actions
AT2G39480 PGP6 P-glycoprotein 6 0.02 OrthoFinder output from all 47 species
Als_g39233 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g22201 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene35821.t1 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene45615.t1 PGP11, Aspi01Gene45615 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene62048.t2 PGP2, Aspi01Gene62048 subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000293.10 PGP11 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Ehy_g20264 No alias subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Gb_29989 PGP9 ABC transporter B family member 9 OS=Arabidopsis... 0.12 OrthoFinder output from all 47 species
MA_14136g0010 PGP20 subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Ore_g27278 No alias subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012919 ABCB19,... subfamily ABCB transporter & original description: CDS=118-4143 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0080.g017905 PGP11 not classified & original description: CDS=139-861 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022750 PGP11 subfamily ABCB transporter & original description: CDS=1-3756 0.01 OrthoFinder output from all 47 species
Smo139408 PGP20 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Tin_g44850 ABCB19,... subfamily ABCB transporter & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 2 88
No external refs found!