Smo406902 (PACid_15419771)


Aliases : PACid_15419771

Description : 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX transferases, transferring glycosyl groups CONTAINS InterPro DOMAIN/s: Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347), F-box domain, cyclin-like (InterPro:IPR001810), F-box domain, Skp2-like (InterPro:IPR022364), Transcription factor jumonji (InterPro:IPR013129), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009) BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06550.1) Has 1510 Blast hits to 1497 proteins in 307 species: Archae - 0 Bacteria - 312 Metazoa - 658 Fungi - 137 Plants - 199 Viruses - 0 Other Eukaryotes - 204 (source: NCBI BLink). & (loc_os03g27250.1 : 676.0


Gene families : OG_01_0006746 (Gene family) Phylogenetic Tree(s): OG0006746_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo406902
Cluster HCCA cluster: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
Solyc04g074490.3.1 Solyc04g074490.3 29.5.11.4.3.2 protein.degradation.ubiquitin.E3.SCF.FBOX... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003347 JmjC_dom 226 339
No external refs found!