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  5. Pir_g30090

Pir_g30090


Description : not classified & original description: none


Gene families : OG0000059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g30090

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00251850 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G75590 No alias SAUR-like auxin-responsive protein family 0.02 OrthoFinder output from all 47 species
Aspi01Gene25406.t1 Aspi01Gene25406 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g26610.1 LOC_Os09g26610 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g22081 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_138556g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_305171g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_43064g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Pir_g57660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05505 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g082510.1.1 Solyc03g082510 Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g056440.3.1 Solyc05g056440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 100 170
No external refs found!