- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : PHL1
Description : transcription factor *(PHR1) & original description: none
Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pir_g29411 | |
| Cluster | HCCA: Cluster_82 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00106p00040830 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G79430 | APL, WDY | Homeodomain-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G40260 | No alias | Homeodomain-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G04030 | No alias | Homeodomain-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G12730 | No alias | Homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g057981 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g078895 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aev_g06650 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g39180 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g10756 | No alias | transcription factor *(CLAUSA) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ala_g12852 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene19889.t1 | Aspi01Gene19889 | transcription factor *(CLAUSA) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Azfi_s0121.g046895 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g19840 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.21G076700.1 | Ceric.21G076700 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g23034 | No alias | transcription factor *(CLAUSA) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g34786 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04782 | No alias | transcription factor *(CLAUSA) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g08815 | KAN2 | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g09607 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26187 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Dde_g21452 | No alias | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01015900001 | APL, WDY | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01021072001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01021225001 | No alias | Putative Myb family transcription factor At1g14600... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01024687001 | No alias | Putative Myb family transcription factor At1g14600... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01036717001 | APL, WDY | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g01480.1 | LOC_Os11g01480 | Putative Myb family transcription factor At1g14600... | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os12g01490.1 | LOC_Os12g01490 | Putative Myb family transcription factor At1g14600... | 0.01 | OrthoFinder output from all 47 species | |
| Len_g48215 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g05894 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g32204 | KAN2 | KANADI-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_15920g0010 | No alias | G2-like GARP transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| MA_52379g0010 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| MA_8183372g0010 | No alias | G2-like GARP transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Ore_g41489 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g61598 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo405399 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc02g080740.3.1 | Solyc02g080740 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g006150.2.1 | Solyc03g006150 | Putative Myb family transcription factor At1g14600... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc07g045000.4.1 | Solyc07g045000 | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g085620.2.1 | Solyc10g085620 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g006280.3.1 | Solyc12g006280 | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g017370.3.1 | APL, WDY, Solyc12g017370 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g12933 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e037761_P001 | Zm00001e037761 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | HCCA |
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| MF | GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | IEP | HCCA |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| No external refs found! |