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  5. Pir_g28939

Pir_g28939 (RALFL22)


Aliases : RALFL22

Description : RALF/RALFL precursor polypeptide & original description: none


Gene families : OG0000846 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000846_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g28939
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00262240 RALFL22,... Phytohormones.signalling peptides.CRP... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00078480 RALFL19,... Phytohormones.signalling peptides.CRP... 0.01 OrthoFinder output from all 47 species
AMTR_s00044p00139580 RALF23,... Phytohormones.signalling peptides.CRP... 0.01 OrthoFinder output from all 47 species
AT3G16570 RALF23, ATRALF23 rapid alkalinization factor 23 0.04 OrthoFinder output from all 47 species
AT4G15800 RALFL33 ralf-like 33 0.03 OrthoFinder output from all 47 species
Gb_29483 No alias RALF/RALFL precursor polypeptide 0.01 OrthoFinder output from all 47 species
LOC_Os01g25540.1 RALFL33, LOC_Os01g25540 RALF/RALFL precursor polypeptide 0.02 OrthoFinder output from all 47 species
Lfl_g16303 RALFL33 RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34310 RALFL34 RALF/RALFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g05711 RALFL33 RALF/RALFL precursor polypeptide & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g07660 RALFL34 RALF/RALFL precursor polypeptide & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e039701_P001 RALFL33, Zm00001e039701 RALF/RALFL precursor polypeptide 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR008801 RALF 88 150
No external refs found!