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  5. Pir_g28901

Pir_g28901


Description : not classified & original description: none


Gene families : OG0000957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g28901
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AT2G15580 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
GSVIVT01037874001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_19820 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_25302 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os01g62640.1 LOC_Os01g62640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10274793g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_10426524g0010 No alias Probable E3 ubiquitin-protein ligase RHY1A... 0.04 OrthoFinder output from all 47 species
Ore_g07226 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g107290.3.1 Solyc01g107290 Probable E3 ubiquitin-protein ligase RHY1A... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 118 160
No external refs found!