Pir_g28525


Description : not classified & original description: none


Gene families : OG0004978 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004978_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g28525
Cluster HCCA: Cluster_230

Target Alias Description ECC score Gene Family Method Actions
Adi_g024085 RPT2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g57259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g25717 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13633 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017412 No alias not classified & original description: CDS=1-1758 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 305 426
IPR000210 BTB/POZ_dom 13 120
No external refs found!