AT5G27620 (CYCH;1)


Aliases : CYCH;1

Description : cyclin H;1


Gene families : OG_01_0004622 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004622_tree ,
OG_02_0005329 (LandPlants) Phylogenetic Tree(s): OG_02_0005329_tree ,
OG_03_0007181 (SeedPlants) Phylogenetic Tree(s): OG_03_0007181_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G27620
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01031086001 No alias Cell cycle.regulation.cyclins.CYCH-type cyclin 0.03 Archaeplastida
GSVIVT01031086001 No alias Cell cycle.regulation.cyclins.CYCH-type cyclin 0.03 LandPlants
LOC_Os03g52750.2 No alias cyclin (CYCH). cyclin subunitof CAK kinase module.... 0.02 LandPlants
GSVIVT01031086001 No alias Cell cycle.regulation.cyclins.CYCH-type cyclin 0.03 SeedPlants
LOC_Os03g52750.2 No alias cyclin (CYCH). cyclin subunitof CAK kinase module.... 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle RCA Interproscan
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation RCA Interproscan
MF GO:0004672 protein kinase activity IDA Interproscan
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEP Interproscan
BP GO:0006366 transcription by RNA polymerase II RCA Interproscan
BP GO:0006396 RNA processing RCA Interproscan
BP GO:0009220 pyrimidine ribonucleotide biosynthetic process RCA Interproscan
BP GO:0009414 response to water deprivation IMP Interproscan
BP GO:0010119 regulation of stomatal movement IMP Interproscan
BP GO:0010440 stomatal lineage progression RCA Interproscan
BP GO:0042023 DNA endoreduplication RCA Interproscan
BP GO:0045736 negative regulation of cyclin-dependent protein serine/threonine kinase activity RCA Interproscan
BP GO:0051726 regulation of cell cycle ISS Interproscan
BP GO:0072593 reactive oxygen species metabolic process IMP Interproscan
BP GO:1990069 stomatal opening IMP Interproscan
BP GO:2000070 regulation of response to water deprivation IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006671 Cyclin_N 77 172
IPR031658 Cyclin_C_2 177 276
No external refs found!