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  5. Pir_g28456

Pir_g28456


Description : actin-binding protein *(NET4) & original description: none


Gene families : OG0001336 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g28456
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00015p00214470 evm_27.TU.AmTr_v1... COP1-interactive protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g024674 No alias actin-cytoskeleton contact protein (NET3) of... 0.03 OrthoFinder output from all 47 species
Solyc06g082570.3.1 Solyc06g082570 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011684 NAB 27 100
No external refs found!