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  5. Pir_g28429

Pir_g28429


Description : Trihelix-type transcription factor & original description: none


Gene families : OG0002113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002113_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g28429
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
Adi_g069214 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009913 No alias Trihelix-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g05375 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os04g45940.1 LOC_Os04g45940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g30006 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e002375_P001 Zm00001e002375 transcription factor (Trihelix) 0.02 OrthoFinder output from all 47 species
Zm00001e024316_P001 Zm00001e024316 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR044822 Myb_DNA-bind_4 33 125
No external refs found!