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  5. Pir_g28300

Pir_g28300 (EPR1, RVE7)


Aliases : EPR1, RVE7

Description : transcription factor *(REVEILLE) & original description: none


Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g28300
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
AT1G01060 LHY1, LHY Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G01520 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G46830 CCA1 circadian clock associated 1 0.03 OrthoFinder output from all 47 species
AT3G09600 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G52660 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Dac_g11557 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025544001 No alias Multi-process regulation.circadian clock.evening element... 0.03 OrthoFinder output from all 47 species
GSVIVT01027456001 CCA1 Multi-process regulation.circadian clock.core oscillator... 0.02 OrthoFinder output from all 47 species
Ore_g32618 No alias circadian clock factor *(REVEILLE) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11968 No alias transcription factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16812 No alias circadian clock factor *(REVEILLE) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g084370.3.1 Solyc10g084370 transcription factor (MYB-related). REVEILLE circadian... 0.03 OrthoFinder output from all 47 species
Zm00001e006465_P001 Zm00001e006465 transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
Zm00001e020531_P001 Zm00001e020531 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e023232_P002 Zm00001e023232 transcription factor (MYB-related). REVEILLE circadian... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 61 104
No external refs found!