Pir_g28271 (SPL8)

Aliases : SPL8

Description : SBP-type transcription factor & original description: none

Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pir_g28271

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01033519001	AtSPL9, SPL9	RNA biosynthesis.transcriptional activation.SBP...	0.03	OrthoFinder output from all 47 species
LOC_Os02g08070.1	SPL8, LOC_Os02g08070	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Zm00001e013795_P002	SPL8, Zm00001e013795	transcription factor (SBP)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	200	273

External Links

No external refs found!