Smo406072 (PACid_15413099)


Aliases : PACid_15413099

Description : 29.1.7 protein.aa activation.alanine-tRNA ligase alanine-tRNA ligasesnucleic acid bindingligases, forming aminoacyl-tRNA and related compoundsnucleotide bindingATP binding FUNCTIONS IN: ligase activity, forming aminoacyl-tRNA and related compounds, alanine-tRNA ligase activity, nucleotide binding, ATP binding, nucleic acid binding INVOLVED IN: alanyl-tRNA aminoacylation, tRNA aminoacylation, translation LOCATED IN: cytoplasm CONTAINS InterPro DOMAIN/s: Threonyl/alanyl tRNA synthetase, SAD (InterPro:IPR012947), Alanyl-tRNA synthetase, class IIc, N-terminal (InterPro:IPR018164), Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro:IPR018163), Alanyl-tRNA synthetase, class IIc, core domain (InterPro:IPR018165) BEST Arabidopsis thaliana protein match is: Alanyl-tRNA synthetase (TAIR:AT1G50200.1) Has 8903 Blast hits to 8903 proteins in 2729 species: Archae - 421 Bacteria - 5979 Metazoa - 328 Fungi - 222 Plants - 105 Viruses - 0 Other Eukaryotes - 1848 (source: NCBI BLink). (original description: no original description)'


Gene families : OG_01_0008470 (Gene family) Phylogenetic Tree(s): OG0008470_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo406072
Cluster HCCA cluster: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AT3G16565 No alias alanine-tRNA ligases;nucleic acid binding;ligases,... 0.06 Gene family
Smo428079 PACid_15411020 29.1.7 protein.aa activation.alanine-tRNA ligase... 0.03 Gene family
Zm00001d008498 GRMZM2G140754 29.1.7 protein.aa activation.alanine-tRNA ligase... 0.01 Gene family

Type GO Term Name Evidence Source
BP GO:0006419 alanyl-tRNA aminoacylation IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR018164 Ala-tRNA-synth_IIc_N 23 111
No external refs found!