Smo405878 (PACid_15416260)


Aliases : PACid_15416260

Description : 26.7 misc.oxidases - copper, flavone etc LSD1-like 3 (LDL3) FUNCTIONS IN: primary amine oxidase activity EXPRESSED IN: cultured cell CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Adrenodoxin reductase (InterPro:IPR000759), SWIRM (InterPro:IPR007526) BEST Arabidopsis thaliana protein match is: Flavin containing amine oxidoreductase family protein (TAIR:AT3G10390.1) Has 1823 Blast hits to 1718 proteins in 423 species: Archae - 23 Bacteria - 1184 Metazoa - 118 Fungi - 119 Plants - 329 Viruses - 0 Other Eukaryotes - 50 (source: NCBI BLink). & (chl4|524320 : 160.0


Gene families : OG_01_0007088 (Gene family) Phylogenetic Tree(s): OG0007088_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo405878
Cluster HCCA cluster: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT4G16310 LDL3 LSD1-like 3 0.1 Gene family
LOC_Os10g38850 Os10g0532100,... 26.7 misc.oxidases - copper, flavone etc LSD1-like 3 (LDL3) 0.06 Gene family
MA_120420g0020 No alias 26.7 misc.oxidases - copper, flavone etc LSD1-like 3 (LDL3) 0.05 Gene family
Solyc04g081100.3.1 Solyc04g081100.3 26.7 misc.oxidases - copper, flavone etc LSD1-like 3 (LDL3) 0.08 Gene family
Zm00001d029714 GRMZM2G030529 26.7 misc.oxidases - copper, flavone etc LSD1-like 3 (LDL3) 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007526 SWIRM 144 225
No external refs found!