AT5G25630


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0009354 (Archaeplastida) Phylogenetic Tree(s): OG_01_0009354_tree ,
OG_02_0007114 (LandPlants) Phylogenetic Tree(s): OG_02_0007114_tree ,
OG_03_0006861 (SeedPlants) Phylogenetic Tree(s): OG_03_0006861_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25630
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.05 Archaeplastida
GSVIVT01035672001 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.1 Archaeplastida
MA_38077g0010 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 Archaeplastida
Smo21211 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 Archaeplastida
Solyc07g032380.4.1 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.1 Archaeplastida
Solyc08g068230.4.1 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.08 Archaeplastida
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.04 LandPlants
GSVIVT01035672001 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.09 LandPlants
Gb_09464 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 LandPlants
Pp3c16_9240V3.1 No alias protein kinase family protein 0.04 LandPlants
Smo21211 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.02 LandPlants
Solyc07g032380.4.1 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.07 LandPlants
Solyc08g068230.4.1 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.08 LandPlants
AMTR_s00109p00045690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g25630... 0.03 SeedPlants
GSVIVT01035672001 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.09 SeedPlants
Gb_09464 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.03 SeedPlants
MA_38077g0010 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.02 SeedPlants
Solyc07g032380.4.1 No alias Pentatricopeptide repeat-containing protein At5g21222... 0.07 SeedPlants
Solyc08g068230.4.1 No alias Pentatricopeptide repeat-containing protein At5g25630... 0.08 SeedPlants

Type GO Term Name Evidence Source
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 257 287
IPR002885 Pentatricopeptide_repeat 114 160
IPR002885 Pentatricopeptide_repeat 329 376
IPR002885 Pentatricopeptide_repeat 186 231
IPR002885 Pentatricopeptide_repeat 397 443
No external refs found!