AT5G24490


Description : 30S ribosomal protein, putative


Gene families : OG_01_0005738 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005738_tree ,
OG_02_0007364 (LandPlants) Phylogenetic Tree(s): OG_02_0007364_tree ,
OG_03_0006761 (SeedPlants) Phylogenetic Tree(s): OG_03_0006761_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G24490
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01038643001 No alias Protein biosynthesis.organelle translation... 0.04 Archaeplastida
Gb_00693 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.02 Archaeplastida
Mp5g07020.1 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.02 Archaeplastida
Solyc06g073090.3.1 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.05 Archaeplastida
GSVIVT01038643001 No alias Protein biosynthesis.organelle translation... 0.04 LandPlants
Mp5g07020.1 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.02 LandPlants
Solyc06g073090.3.1 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.05 LandPlants
GSVIVT01038643001 No alias Protein biosynthesis.organelle translation... 0.04 SeedPlants
Solyc06g073090.3.1 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.05 SeedPlants
Zm00001e006414_P001 No alias plastidial ribosome hibernation-promoting factor (PSRP1) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Interproscan
CC GO:0005840 ribosome ISS Interproscan
BP GO:0006412 translation ISS Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009534 chloroplast thylakoid IDA Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032528 Ribosom_S30AE_C 228 281
IPR003489 RHF/RaiA 85 181
No external refs found!