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  5. Pir_g25386

Pir_g25386


Description : miRNA cytidylyltransferase *(NTP2/6/7/8) & original description: none


Gene families : OG0000914 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000914_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g25386
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
Adi_g003416 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19180 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.03 OrthoFinder output from all 47 species
Als_g18514 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.03 OrthoFinder output from all 47 species
LOC_Os03g11240.1 LOC_Os03g11240 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
LOC_Os11g02320.2 LOC_Os11g02320 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_486341g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g18860.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ppi_g53201 No alias miRNA cytidylyltransferase *(NTP2/6/7/8) & original... 0.02 OrthoFinder output from all 47 species
Solyc01g095730.4.1 Solyc01g095730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e000696_P003 Zm00001e000696 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038746_P001 Zm00001e038746 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008531 riboflavin kinase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!