Smo405220 (PACid_15411574)


Aliases : PACid_15411574

Description : 27.3.6 RNA.regulation of transcription.bHLH,Basic Helix-Loop-Helix family HECATE 1 (HEC1) FUNCTIONS IN: sequence-specific DNA binding transcription factor activity INVOLVED IN: transmitting tissue development, carpel formation, regulation of transcription LOCATED IN: nucleus EXPRESSED IN: 9 plant structures EXPRESSED DURING: 6 growth stages CONTAINS InterPro DOMAIN/s: Helix-loop-helix DNA-binding domain (InterPro:IPR001092), Helix-loop-helix DNA-binding (InterPro:IPR011598) BEST Arabidopsis thaliana protein match is: basic helix-loop-helix (bHLH


Gene families : OG_01_0000523 (Gene family) Phylogenetic Tree(s): OG0000523_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo405220
Cluster HCCA cluster: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Gene family
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Gene family
MA_83500g0010 No alias 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.01 Gene family
MA_90862g0010 No alias No description available 0.01 Gene family
Zm00001d049721 GRMZM2G354618,... 27.3.6 RNA.regulation of transcription.bHLH,Basic... 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 299 339
No external refs found!