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  5. Pir_g25276

Pir_g25276


Description : not classified & original description: none


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g25276

Target Alias Description ECC score Gene Family Method Actions
ATMG00850 ORF107E DNA/RNA polymerases superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g01264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23362 ORF107E not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g41334 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01100.t1 ORF107E, Aspi01Gene01100 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35074.t1 Aspi01Gene35074 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60818.t1 ORF158, Aspi01Gene60818 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66302.t1 ORF107E, Aspi01Gene66302 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66511.t1 Aspi01Gene66511 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44516 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_09199 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.02 OrthoFinder output from all 47 species
Len_g53514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g27370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31118 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29877 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g44504 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g21638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42019 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13967 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37913 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g40723 ORF158 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g40730 ORF158 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pp3c14_25520V3.1 Pp3c14_25520 DNA/RNA polymerases superfamily protein 0.03 OrthoFinder output from all 47 species
Sam_g17630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g036185.1.1 Solyc02g036185 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g18066 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000477 RT_dom 25 173
No external refs found!