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  5. Pir_g25025

Pir_g25025


Description : regulatory protein *(UBA1/2) of UBP1 activity & original description: none


Gene families : OG0000537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g25025

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00228130 UBA2A,... UBP1-associated protein 2A OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00101p00040700 UBA2A,... UBP1-associated protein 2A OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Aev_g06608 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
Als_g10456 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.02 OrthoFinder output from all 47 species
Ehy_g14726 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.03 OrthoFinder output from all 47 species
LOC_Os01g42820.3 LOC_Os01g42820 UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_158497g0010 No alias UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Pir_g48132 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.01 OrthoFinder output from all 47 species
Pnu_g13196 No alias regulatory protein *(UBA1/2) of UBP1 activity & original... 0.02 OrthoFinder output from all 47 species
Sam_g09808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020692_P003 Zm00001e020692 UBP1-associated protein 2C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 177 244
IPR000504 RRM_dom 88 155
No external refs found!