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  5. AT5G23920

AT5G23920


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane, vacuole; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G52420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG_01_0002237 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002237_tree ,
OG_02_0008070 (LandPlants) Phylogenetic Tree(s): OG_02_0008070_tree ,
OG_03_0009059 (SeedPlants) Phylogenetic Tree(s): OG_03_0009059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G23920
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00235110 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
LOC_Os10g40040.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g025430.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g40040.1 No alias no hits & (original description: none) 0.02 LandPlants
AMTR_s00009p00233140 evm_27.TU.AmTr_v1... No description available 0.01 SeedPlants
LOC_Os10g40040.1 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!