AMTR_s00013p00242590 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00013.203

Description : Solute transport.carrier-mediated transport.BART superfamily.AEC family.auxin efflux transporter (PIN-type)


Gene families : OG_01_0000353 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000353_tree ,
OG_02_0000237 (LandPlants) Phylogenetic Tree(s): OG_02_0000237_tree ,
OG_03_0000465 (SeedPlants) Phylogenetic Tree(s): OG_03_0000465_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00013p00242590
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g51780.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Solyc06g059730.3.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.02 LandPlants
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.01 LandPlants
LOC_Os01g51780.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
LOC_Os01g58860.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 LandPlants
Pp3c10_24880V3.1 No alias Auxin efflux carrier family protein 0.01 LandPlants
Solyc06g059730.3.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 LandPlants
Solyc07g006900.2.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 LandPlants
Zm00001e020346_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 LandPlants
Zm00001e036414_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 LandPlants
AT1G70940 PIN3, ATPIN3 Auxin efflux carrier family protein 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004776 Mem_trans 1 414
No external refs found!