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  5. Pir_g24504

Pir_g24504


Description : not classified & original description: none


Gene families : OG0000872 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000872_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g24504

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00155950 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00046p00044470 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G05725 No alias Protein of unknown function (DUF3511) 0.02 OrthoFinder output from all 47 species
AT4G09890 No alias Protein of unknown function (DUF3511) 0.03 OrthoFinder output from all 47 species
Ala_g36763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31744 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.02G034600.1 Ceric.02G034600 not classified & original description: pacid=50586050... 0.03 OrthoFinder output from all 47 species
Ceric.26G000600.1 Ceric.26G000600 not classified & original description: pacid=50599959... 0.05 OrthoFinder output from all 47 species
Ceric.27G054600.1 Ceric.27G054600 not classified & original description: pacid=50606012... 0.05 OrthoFinder output from all 47 species
Dac_g19770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47475 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os06g47220.1 LOC_Os06g47220 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ore_g27778 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc08g062810.1.1 Solyc08g062810 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g11578 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g29742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001392_P001 Zm00001e001392 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e017498_P001 Zm00001e017498 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e030288_P001 Zm00001e030288 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR021899 DUF3511 88 130
No external refs found!