AT5G23570 (ATSGS3, SGS3)


Aliases : ATSGS3, SGS3

Description : XS domain-containing protein / XS zinc finger domain-containing protein-related


Gene families : OG_01_0002118 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002118_tree ,
OG_02_0001921 (LandPlants) Phylogenetic Tree(s): OG_02_0001921_tree ,
OG_03_0004085 (SeedPlants) Phylogenetic Tree(s): OG_03_0004085_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G23570
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
Solyc04g025300.3.1 No alias SGS3 stabilization factor of DNA methylation pathway 0.02 Archaeplastida
LOC_Os12g09580.1 No alias SGS3 stabilization factor of DNA methylation pathway 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005783 endoplasmic reticulum IDA Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0009616 RNAi-mediated antiviral immune response IMP Interproscan
BP GO:0009616 RNAi-mediated antiviral immune response RCA Interproscan
BP GO:0010025 wax biosynthetic process IGI Interproscan
BP GO:0010050 vegetative phase change IMP Interproscan
BP GO:0010050 vegetative phase change RCA Interproscan
BP GO:0010267 production of ta-siRNAs involved in RNA interference IMP Interproscan
BP GO:0010267 production of ta-siRNAs involved in RNA interference RCA Interproscan
BP GO:0035196 production of miRNAs involved in gene silencing by miRNA RCA Interproscan
BP GO:0051607 defense response to virus IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005381 Znf-XS_domain 228 265
IPR005380 XS_domain 299 410
No external refs found!