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  5. Pir_g24244

Pir_g24244 (ATPIN1, PIN1)


Aliases : ATPIN1, PIN1

Description : auxin efflux transporter *(PIN) & original description: none


Gene families : OG0000569 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000569_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g24244

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00250330 EIR1, WAV6,... Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
AMTR_s00038p00079560 PIN7, ATPIN7,... Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
AT1G77110 PIN6 Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.03 OrthoFinder output from all 47 species
Als_g16498 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14250 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08211 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025749001 ATPIN1, PIN1 Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
GSVIVT01031663001 PIN3, ATPIN3 Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
LOC_Os01g58860.1 PIN8, ATPIN8,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
LOC_Os06g44970.1 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 OrthoFinder output from all 47 species
LOC_Os08g41720.1 PIN5, LOC_Os08g41720 auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Mp3g21660.1 ATPIN4, PIN4 auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 OrthoFinder output from all 47 species
Ore_g07069 ATPIN1, PIN1 auxin efflux transporter *(PIN) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11165 EIR1, WAV6,... auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g15666 ATPIN4, PIN4 auxin efflux transporter *(PIN) & original description: none 0.05 OrthoFinder output from all 47 species
Smo102666 PIN3, ATPIN3 Solute transport.carrier-mediated transport.BART... 0.05 OrthoFinder output from all 47 species
Smo119024 EIR1, WAV6,... Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
Smo231064 EIR1, WAV6,... Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
Smo268490 EIR1, WAV6,... Solute transport.carrier-mediated transport.BART... 0.04 OrthoFinder output from all 47 species
Zm00001e010118_P004 PIN5, Zm00001e010118 auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 OrthoFinder output from all 47 species
Zm00001e023910_P002 ATPIN1, PIN1,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species
Zm00001e037682_P001 EIR1, WAV6,... auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 704
No external refs found!