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  5. Pir_g24076

Pir_g24076


Description : nucleotidyl transferase component *(TRL) of TRAMP RNA-exosome-regulation complex & original description: none


Gene families : OG0001897 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001897_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g24076
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Ore_g17108 No alias nucleotidyl transferase component *(TRL) of TRAMP... 0.02 OrthoFinder output from all 47 species
Ore_g22983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002058 PAP_assoc 311 369
IPR002934 Polymerase_NTP_transf_dom 159 255
No external refs found!