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  5. Pir_g23989

Pir_g23989 (TOM2A)


Aliases : TOM2A

Description : not classified & original description: none


Gene families : OG0001026 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001026_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pir_g23989

Target Alias Description ECC score Gene Family Method Actions
AT2G20230 No alias Tetraspanin family protein 0.02 OrthoFinder output from all 47 species
Adi_g023224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11164 TOM2A not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26082 TOM2A not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g03697 TOM2A not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38410 TOM2A not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os08g18044.2 TOM2A, LOC_Os08g18044 TOM2A tobamovirus multiplication replication host factor 0.02 OrthoFinder output from all 47 species
MA_6839505g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Nbi_g04736 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g00592 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05104 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0088.g018542 TOM2A not classified & original description: CDS=285-1187 0.03 OrthoFinder output from all 47 species
Solyc08g077220.3.1 TOM2A, Solyc08g077220 TOM2A tobamovirus multiplication replication host factor 0.01 OrthoFinder output from all 47 species
Spa_g11017 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05924 TOM2A not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 155 218
No external refs found!